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TEST-INFRA: [dependency-security] Manual dependency security review required #5936

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opened 2026-04-09 11:58:46 +00:00 by HAL9000 · 1 comment

HAL9000 commented

2026-04-09 11:58:46 +00:00

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Branch: test-infra/dependency-security-manual-review
Commit Message: chore(deps): perform manual security review of project dependencies
Milestone: (none — backlog)
Parent Epic: #5685

Description

The automated dependency security analysis failed due to limitations in the available tools. A manual review of the project's dependencies is required to identify any potential vulnerabilities.

Please perform the following steps:

Review the dependencies listed in pyproject.toml.
Check for known vulnerabilities in the dependencies using a security scanner or a public vulnerability database.
Create new issues for any identified vulnerabilities.

Subtasks

Review all dependencies listed in pyproject.toml (both runtime and dev/test dependencies)
Run a security scanner (e.g., pip-audit, safety, or snyk) against the dependency list
Cross-reference dependencies against public vulnerability databases (e.g., NVD, OSV, GitHub Advisory Database)
Document findings and create new issues for any identified vulnerabilities
Verify no critical or high-severity vulnerabilities remain untracked

Definition of Done

All dependencies in pyproject.toml have been reviewed for known vulnerabilities
Any identified vulnerabilities have been filed as separate issues with appropriate priority labels
A summary comment is posted on this issue documenting the review outcome
All nox stages pass
Coverage >= 97%

Backlog note: This issue was discovered during autonomous operation
on milestone v3.8.0. It does not block milestone completion and has been
placed in the backlog for human review and future milestone assignment.

Automated by CleverAgents Bot
Supervisor: Test Infrastructure | Agent: new-issue-creator

## Metadata - **Branch**: `test-infra/dependency-security-manual-review` - **Commit Message**: `chore(deps): perform manual security review of project dependencies` - **Milestone**: *(none — backlog)* - **Parent Epic**: #5685 ## Description The automated dependency security analysis failed due to limitations in the available tools. A manual review of the project's dependencies is required to identify any potential vulnerabilities. Please perform the following steps: 1. Review the dependencies listed in `pyproject.toml`. 2. Check for known vulnerabilities in the dependencies using a security scanner or a public vulnerability database. 3. Create new issues for any identified vulnerabilities. ## Subtasks - [ ] Review all dependencies listed in `pyproject.toml` (both runtime and dev/test dependencies) - [ ] Run a security scanner (e.g., `pip-audit`, `safety`, or `snyk`) against the dependency list - [ ] Cross-reference dependencies against public vulnerability databases (e.g., NVD, OSV, GitHub Advisory Database) - [ ] Document findings and create new issues for any identified vulnerabilities - [ ] Verify no critical or high-severity vulnerabilities remain untracked ## Definition of Done - [ ] All dependencies in `pyproject.toml` have been reviewed for known vulnerabilities - [ ] Any identified vulnerabilities have been filed as separate issues with appropriate priority labels - [ ] A summary comment is posted on this issue documenting the review outcome - [ ] All nox stages pass - [ ] Coverage >= 97% > **Backlog note:** This issue was discovered during autonomous operation > on milestone v3.8.0. It does not block milestone completion and has been > placed in the backlog for human review and future milestone assignment. --- **Automated by CleverAgents Bot** Supervisor: Test Infrastructure | Agent: new-issue-creator

HAL9000 added a new dependency

2026-04-09 12:01:33 +00:00

#5685 TEST-INFRA: [dependency-security] Replace inactive test dependency 'radon'

HAL9000 referenced this issue

2026-04-09 12:02:07 +00:00

[AUTO-WATCHDOG] System Health Report (Cycle 21) #5915

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2026-04-09 12:20:22 +00:00

HAL9000 commented

2026-04-09 12:51:33 +00:00

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Issue triaged by project owner:

State: Verified
Priority: Backlog — Manual dependency security review is a maintenance task. The issue was created because automated tools failed, not because a specific vulnerability was found. This is a proactive security hygiene task.
Milestone: None (backlog) — This is a future maintenance task.
Story Points: 3 — M — A thorough manual review of all dependencies in pyproject.toml against known vulnerability databases takes 4-8 hours.
MoSCoW: MoSCoW/Should have — Security hygiene is important. Dependencies should be reviewed periodically for known vulnerabilities. This should be done but is not blocking any milestone.
Parent Epic: #5685 (as noted in the issue body)

Note: Consider using pip-audit or safety tools to automate this check in CI rather than relying on manual review.

Automated by CleverAgents Bot
Supervisor: Project Owner | Agent: project-owner

Issue triaged by project owner: - **State**: Verified - **Priority**: Backlog — Manual dependency security review is a maintenance task. The issue was created because automated tools failed, not because a specific vulnerability was found. This is a proactive security hygiene task. - **Milestone**: None (backlog) — This is a future maintenance task. - **Story Points**: 3 — M — A thorough manual review of all dependencies in `pyproject.toml` against known vulnerability databases takes 4-8 hours. - **MoSCoW**: MoSCoW/Should have — Security hygiene is important. Dependencies should be reviewed periodically for known vulnerabilities. This should be done but is not blocking any milestone. - **Parent Epic**: #5685 (as noted in the issue body) Note: Consider using `pip-audit` or `safety` tools to automate this check in CI rather than relying on manual review. --- **Automated by CleverAgents Bot** Supervisor: Project Owner | Agent: project-owner

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2026-04-09 13:11:34 +00:00

HAL9000 referenced this issue

2026-04-09 13:22:49 +00:00

[AUTO-PROJ-OWN] Project Owner Report (Cycle 30) #5908

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2026-04-09 13:23:19 +00:00

HAL9000 referenced this issue

2026-04-09 13:39:05 +00:00

[AUTO-GROOMER] Backlog Grooming Report (Cycle 61) #5909

HAL9000 referenced this issue

2026-04-15 23:33:31 +00:00

[AUTO-INF-8] Harden dependency security posture for cleveragents-core #9889

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2026-04-18 08:57:07 +00:00

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docs/timeline-day-104-auto-time-2

auto-arch-1/add-v380-v390-milestone-plan

docs/developer-setup-guide

fix/auto-profile-spec-prose-description

auto-arch-10/spec-tui-a2a-integration-layer

spec/resource-event-types-clarification

auto-docs-4/changelog-and-observability

auto-arch-4/adr-049-layered-boundary-enforcement

docs/a2a-protocol-autonomy-hardening

auto-arch-9/spec-v3.8.0-milestone-plan

docs/auto-docs-3-reference-index

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docs/timeline-day104-cycle1-auto-time-4

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auto-arch-6/adr-049-spec-restructuring

docs/auto-docs-1-v340-acms-context-management

docs/auto-docs-1-v320-v330-cli-reference

auto-arch-5/v3.9.0-milestone-plan

test/create-scripts

auto-time-1-day104

timeline/day-104-2026-04-14

docs/auto-time-4-day103-cycle5

auto-time-3-day103-cycle4

auto-docs-5-architecture-overview

spec/three-way-merge-strategy-v3.3.0

spec/checkpoint-system-v3.3.0

auto-docs-4-api-docs-update

auto-docs-1-changelog-expansion

spec/invariant-management-system-v3.2.0

pr-8289

spec/plan-correction-engine-v3.2.0

spec/layered-architecture-boundary-policy

spec/tui-materializer-a2a-integration-v3.7.0

spec/decision-recording-system-v3.2.0

docs/auto-docs-1-milestone-overview

pr-7484

pr-4212

auto-arch-3/v3.8.0-milestone-plan

auto-docs-6/troubleshooting-and-config

auto-time-1-day103-session5

auto-docs-5/contributor-guide-and-readme

docs/plan-tree-ulid-examples

docs/m3-spec-clarify-path-datetime-plugin-contracts

docs/auto-docs-cycle-10-diagnostics-ref

auto-docs-3/user-guide-and-architecture

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spec/update-validation-attach-project-delete

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docs/auto-docs-cycle-13-updates

docs/timeline-day-102-auto-time

timeline/day-103-2026-04-13

spec/arch-invariant-cli-completeness

spec/update-cycle1-validation-attach-project-delete

docs/add-session-management-showcase

spec/arch-sandbox-path-correction-cycle9

spec/architecture-v380-milestone-plan

docs/auto-docs-cycle-12-updates

docs/cycle-1-validation-gate-fix

docs/2026-04-08-unreleased-changelog

docs/auto-docs-cycle-2-2026-04-10

docs/session-4615-2026-04-08-cycle1

feat/issue-6361-shell-safety-service-tui

spec/architecture-cycle-25-new-features

fix/issue-6345-automation-profile-add-output

docs/timeline-day-102-2026-04-12

docs/cycle-2-git-worktree-acms-hydrator

spec/arch-sandbox-cleanup-discovery

docs/timeline-day96-2026-04-08

docs/auto-docs-cycle-11

spec/fix-sandbox-strategy-protocol-name

spec/arch-acms-tier-hydration

fix/v3.4.0/context-settings-defaults

docs/add-example-repl-and-actor-run

docs/auto-docs-cycle-10-updates

docs/session-4-2026-04-08-updates

docs/showcase-all-examples-consolidated

docs/timeline-day-97

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timeline/day-101-2026-04-11

docs/timeline-day99-2026-04-09-v2

docs/auto-docs-cycle-2-worktree-acms

spec/architecture-v3.8.0-milestone-plan

docs/api-lsp-acms-reference

improvement/agent-bug-hunt-pool-supervisor-yaml-syntax-fix

spec/project-delete-deleted-at-field

spec/architecture-provider-registry-tui-materializer

spec/document-reconciliation-blocked-error-5942

fix/issue-7482-git-log-injection

spec/devcontainer-auto-discovery-schema

feat/issue-6350-conversation-content-pruning

docs/update-module-guides-2026-04-10

timeline/day-100-2026-04-10-auto-time-cycle1

timeline/day-99-2026-04-09-auto-time-v2

docs/cycle-3-module-guides

timeline/day-99-2026-04-09-auto-time

pr-4226

spec/additional-llm-providers-gemini-groq-cohere-together-ollama-mistral

spec/document-context-tier-hydrator-6175

docs/timeline-day99-2026-04-09

spec/invariant-cli-clarifications

docs/add-example-project-init-and-context-management

spec/reconciliation-blocked-error-documentation

spec/fix-invariant-precedence-reference-5861

spec/fix-plan-correct-accepts-plan-id-5558

spec/fix-validation-attach-synopsis-5328

docs/timeline-day-99-cycle-1

docs/timeline-day-99-cycle-2

fix/actor-context-list-regex-arg

docs/timeline-day-99-cycle-3

spec/arch-security-mode-init

docs/auto-docs-cycle-9-updates

fix-resource-fix-resource-remove-to-check-correct-edge-table

feat/issue-6434-tui-env-var-expansion

fix/issue-6321-plan-prompt-timing-field

fix/issue-6322-resource-add-url-flag

feat/issue-6348-sessions-screen

spec/plan-show-command

temp

feat/harden-label-restrictions-1775753628

spec/invariant-reconciliation-failure-behavior

spec/add-reconciliation-failure-behavior-5942

spec/architecture-corrections-cycle3

spec/checkpoint-trigger-names-and-config-key-fix

spec/fix-ai-provider-interface-5801

spec/azure-api-version-default-update

docs/auto-docs-writer-cycle1-labels

spec/fix-resource-type-yaml-format-5622

spec/add-plan-revert-resume-commands-5574

docs/auto-docs-cycle-1-2026-04-09

spec/plan-correct-plan-id-or-decision-id-5558

spec/fix-subgraph-node-actor-ref-field-5427

issue/5284-master-ci-fix

timeline/day-99-2026-04-09-v2

merge-me

docs/session-3377-initial-docs-update

fix/llm-provider-subpackage-exports

spec/arce-acronym-and-tui-keybinding-fixes

spec/architecture-corrections-cycle2

spec/architecture-corrections-cycle1

docs/cycle-1-updates

spec/tui-clarifications-session-export-persona

docs/session-4940-2026-04-08-cycle1

spec/architecture-milestone-plan-v3.2-v3.7

docs/session-4743-2026-04-08-cycle1

docs/timeline-day-98

fix/plan-lifecycle-service-rollback-method

docs/timeline-day98-2026-04-08-v2

docs/add-example-action-and-plan-management

docs/session-2026-04-06-updates

docs/ca-docs-writer-v3.8.1-2026-04-05

fix/session-tell-stub-missing-panels-and-actor-execution

improvement/agent-arch-guard-clone-failure-handling

improvement/agent-test-infra-health-spam-fix-v2

fix-tdd-invert-non-assertion-exceptions

improvement/agent-arch-guard-clone-failure

bugfix/3472-fix-tdd-inversion-logic

bugfix/989-fix-persistence-json-decode-error

improvement/agent-supervisor-tracking-labels-v2

docs/timeline-day95-v2

docs/timeline-day95-final

docs/update-lsp-api-and-changelog

fix/lsp-resource-handler-module-missing

docs/timeline-day95-final-2026-04-05

fix/a2a-plan-correct-rollback-wiring

docs/add-lsp-api-and-changelog-2026-04-05

fix/tool-registry-validation-type-discriminator

docs/v3.7.0-documentation-update

docs/ca-docs-writer-2026-04-05-cycle2

fix/invariant-set-merge-action-scope

docs/unreleased-feature-docs

fix/concurrency-cost-tracker-record-usage-race-condition

improvement/agent-ca-test-infra-improver-failure-handling

docs/update-changelog-mcp-plan-ci-2026-04-05

improvement/agent-pr-reviewer-milestone-prioritization

docs/timeline-day95-refresh-2026-04-05

improvement/agent-mandatory-labels-tracking-issues

docs/api-domain-providers-changelog-2026-04-05

docs/ca-docs-writer-2026-04-05

docs/timeline-day95-refresh

fix/skill-add-include-validation

docs/timeline-day-95-2026-04-05-update3

docs/timeline-day-95-2026-04-05-update2

docs/ci-incident-runbook-2597

improvement/agent-ca-test-infra-improver-worker-api-mode

docs/shell-safety-api-and-readme-highlights

docs/timeline-day-55-2026-04-04-v2

docs/timeline-day-55-2026-04-04

docs/timeline-day54-update3

improvement/agent-ca-test-infra-improver-fixes

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feature/m6-tantivy-backend

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feat/server-auth-namespace

feature/m8-session-editing

feature/llm-actor-subplan-wiring

feature/m8-tui-first-run-actor-selection

feature/m8-tui-conversation-block-catalog

feature/m8-tui-settings-screen

feature/m7-e2e-porting

feature/m6-estimation-historical-stats

feature/m8-tui-persona-export-import

feature/m8-tui-sessions-screen

feature/m7-graph-backend

feature/m8-tui-block-context-menu

feature/m8-tui-tool-call-expand

feature/m4-missing-builtin-tools

docs/v3.7.0-release-docs

feature/m8-tui-session-export

test/e2e-wf15-disaster-recovery

test/e2e-wf03-refactoring

test/e2e-m3-acceptance

feature/m8-tui-prompt-history

feature/m8-tui-actor-thought-block-rendering

bugfix/m6-build-hierarchy-child-ids

feature/resource-inheritance-wiring

test/e2e-wf09-session

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test/e2e-wf08-cloud-infra

test/e2e-wf02-test-generation

test/e2e-wf13-custom-profile

test/e2e-wf11-graph-actor

test/e2e-wf01-hello-world

test/int-wf17-explicit-container

test/int-wf12-hierarchical

test/int-wf15-disaster-recovery

test/int-wf13-custom-profile

test/int-wf03-refactoring

test/int-wf11-graph-actor

test/int-wf10-batch

test/int-wf09-session

feature/m3-tdd-issue-consistency-gate

feature/m3-invariant-enforcement-strategize

test/int-wf18-container-clone

test/int-wf01-hello-world

feature/m6-diagnostic-dashboard-health-categories

feature/m6-cli-polish

fix/e2e-db-isolation

feature/m7-post-tui

feature/m9-asgi-endpoint

feature/m7-post-server

tdd/m7-audit-session-race

tdd/m3-skill-add-regression

feature/m9-remote-repos

feature/fs-mount-file-types

tdd/container-resolve-crash

test/e2e-m1-acceptance

test/e2e-m2-acceptance

eugen.thaci-patch-3

eugen.thaci-patch-2

eugen.thaci-patch-1

aditya-fix-latest

feature/m4-secret-masking-llm-context

aditya-fix

refactor/m3-replace-mktemp

refactor/m3-remove-unittest-mock-integration

refactor/m3-remove-robot-mock-imports

refactor/m3-remove-mock-llm-integration

docs/improved-menu-adr

feature/m7-post-auth

feature/m3-fix-resource-bootstrap

feature/post-safety-profile-tests

integration/batch-2026-03-02

feat/slipcover

docs/safety-profile-spec-composition

integrate/freemo-batch-1

feature/m4-error-recovery

feature/m4-security-template

feature/m3-validation-pipeline

develop-aditya-2

feature/m3-diff-review

feature/m3-validation-apply

feature/m6-acp-stubs

feature/m4-correction-flows

feature/m1-plan-execute-runtime

feature/m4-security-exceptions

feature/m4-definition-of-done

feature/m4-correction-model

feature/m1-apply-pipeline

feature/m5-automation-profiles

feature/m2-lsp-stubs

feature/m3-invariants

feature/m1-actor-runtime

feature/docs-v2-restore

feature/m6-perf-scale

feature/m6-validation-edge

feature/m3-session-cli

feature/m1-persistence-tests-robot

feature/m3-config-cli

feature/m1-cli-tests-robot

feature/m5-subplan-tests

feature/m6-review-playbook

feature/aditya-m3-actor-loader

feature/m3-skill-protocol

feature/m4-automation-legacy-cleanup

feature/m3-change-model

feature/m3-skill-git

feature/m3-skill-registry

feature/m4-security-eval

fix/robot-tests

feature/m3-actor-registry

feature/m3-tool-cli

feature/m4-automation-profiles-cli

feature/m2-resource-cli-extensions

feature/m3-actor-loader

feature/m3-tool-domain-robot

feature/m3-skill-domain-robot

feature/m3-skill-cli

feature/m1-resource-db-robot-tests

feature/m3-session-domain-robot

feature/m1-persistence-tests

feature/m1-cli-tests

ten-branches-backup

feature/m3-skill-schema

feature/m3-session-persistence

feature/automation-profiles-and-resource-dag

feature/m1-plan-repo

feature/m1-db-plan-phase-rebaseline

feat/B4-sandbox

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feat/B5-project-persistence

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feat/b1-data-models

feat-repo-manager-and-sourcegraph-support

feat/actor-schema

fix/component-isolation-security-fix

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fix/error-handling-security-fix

fix/concurrency-security-fix

fix/serialization-security-fix

fix/server-side-request-forgery-security-fix

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fix/template-injection-fix

fix/data-injection-fix

tests/unit-tests

latest/poetry-generator

poetry-generator

config/contract-metadata-extractor

docs/readme-yaml-syntax

config/memory-yaml

fix/double-response

brent-additions

intel_2_demo

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#5685 TEST-INFRA: [dependency-security] Replace inactive test dependency 'radon'

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