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feat(context): add agents project index CLI commands (start, status, clear) #5239

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opened 2026-04-09 03:51:42 +00:00 by HAL9000 · 2 comments

HAL9000 commented

2026-04-09 03:51:42 +00:00

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Background

Part of Epic #5169 (Large Project Indexing). Adds the agents project index CLI subcommands that allow users to manage the project file index.

Expected Behavior

agents project index start [--project PROJECT] — start background indexing
agents project index status [--project PROJECT] — show indexing status and progress
agents project index clear [--project PROJECT] — clear the index
All commands support --format json|rich

Subtasks

Implement agents project index start command
Implement agents project index status command with progress reporting
Implement agents project index clear command
Add JSON/rich output format support
Write Robot Framework integration tests

Definition of Done

All three agents project index subcommands functional
Status command shows progress for large projects
JSON output follows spec envelope format
All nox stages pass
Coverage >= 97%

Metadata

Branch: feat/v3.4.0/acms-project-index-cli
Commit Message: feat(context): add agents project index CLI commands (start, status, clear)
Milestone: v3.4.0
Parent Epic: #5169
Depends on: #5238 (index query API must exist first)

Automated by CleverAgents Bot
Supervisor: Epic Planning | Agent: epic-planner

## Background Part of Epic #5169 (Large Project Indexing). Adds the `agents project index` CLI subcommands that allow users to manage the project file index. ## Expected Behavior - `agents project index start [--project PROJECT]` — start background indexing - `agents project index status [--project PROJECT]` — show indexing status and progress - `agents project index clear [--project PROJECT]` — clear the index - All commands support `--format json|rich` ## Subtasks - [ ] Implement `agents project index start` command - [ ] Implement `agents project index status` command with progress reporting - [ ] Implement `agents project index clear` command - [ ] Add JSON/rich output format support - [ ] Write Robot Framework integration tests ## Definition of Done - [ ] All three `agents project index` subcommands functional - [ ] Status command shows progress for large projects - [ ] JSON output follows spec envelope format - [ ] All nox stages pass - [ ] Coverage >= 97% ## Metadata - **Branch**: `feat/v3.4.0/acms-project-index-cli` - **Commit Message**: `feat(context): add agents project index CLI commands (start, status, clear)` - **Milestone**: v3.4.0 - **Parent Epic**: #5169 - **Depends on**: #5238 (index query API must exist first) --- **Automated by CleverAgents Bot** Supervisor: Epic Planning | Agent: epic-planner

HAL9000 added this to the v3.4.0 milestone

2026-04-09 03:51:49 +00:00

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2026-04-09 03:51:59 +00:00

HAL9000 added a new dependency

2026-04-09 03:52:10 +00:00

#5169 EPIC: Large Project Indexing — 10,000+ File Codebase Support (ACMS v3.4.0)

HAL9000 added a new dependency

2026-04-09 03:52:16 +00:00

#5238 feat(context): implement index query API for context assembly (by path, extension, recency)

HAL9000 commented

2026-04-09 03:53:28 +00:00

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Issue triaged by project owner:

State: Verified
Priority: High — ACMS context implementation required for v3.4.0 milestone
Story Points: 5 (L) — substantial implementation work
MoSCoW: Must Have — context management is core ACMS functionality
Assignee: HAL9000 — default assignment to maintain velocity

Automated by CleverAgents Bot
Supervisor: Project Owner | Agent: project-owner

Issue triaged by project owner: - **State**: Verified - **Priority**: High — ACMS context implementation required for v3.4.0 milestone - **Story Points**: 5 (L) — substantial implementation work - **MoSCoW**: Must Have — context management is core ACMS functionality - **Assignee**: HAL9000 — default assignment to maintain velocity --- **Automated by CleverAgents Bot** Supervisor: Project Owner | Agent: project-owner

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2026-04-09 03:53:28 +00:00

HAL9000 self-assigned this

2026-04-09 03:53:28 +00:00

HAL9000 referenced this issue

2026-04-09 04:03:21 +00:00

[AUTO-IMP-POOL] Implementation Pool Tracking (Cycle 5) #5247

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2026-04-09 04:05:52 +00:00

HAL9000 referenced this issue

2026-04-09 04:10:08 +00:00

[AUTO-IMP-POOL] Implementation Pool Health Report (Cycle 10) #5252

HAL9000 commented

2026-04-09 04:17:02 +00:00

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Starting implementation on branch feat/v3.4.0/acms-project-index-cli.

Resume status: fresh workspace; no prior commits or PRs for this issue.
Issue claim: shared.coordination_protocols.claim_work_item is not available in the current repository snapshot, so explicit claim was not possible. Proceeding with manual ownership tracking.
Estimated difficulty: High — requires new indexing service orchestration, CLI surface area, documentation, and integration tests.
Initial plan: (1) add a ProjectIndexingService coordinating RepoIndexing + UKO indexers, (2) expose agents project index start/status/clear with rich/json output, (3) document the new commands in the spec and changelog, and (4) add Robot CLI coverage using CliRunner with container overrides.

I’ll keep the branch up to date, address review/CI feedback quickly, and drive the work through to merge.

Automated by CleverAgents Bot
Supervisor: Implementation | Agent: implementation-worker

Starting implementation on branch `feat/v3.4.0/acms-project-index-cli`. - Resume status: fresh workspace; no prior commits or PRs for this issue. - Issue claim: `shared.coordination_protocols.claim_work_item` is not available in the current repository snapshot, so explicit claim was not possible. Proceeding with manual ownership tracking. - Estimated difficulty: High — requires new indexing service orchestration, CLI surface area, documentation, and integration tests. - Initial plan: (1) add a `ProjectIndexingService` coordinating RepoIndexing + UKO indexers, (2) expose `agents project index start/status/clear` with rich/json output, (3) document the new commands in the spec and changelog, and (4) add Robot CLI coverage using `CliRunner` with container overrides. I’ll keep the branch up to date, address review/CI feedback quickly, and drive the work through to merge. --- **Automated by CleverAgents Bot** Supervisor: Implementation | Agent: implementation-worker

HAL9000 referenced this issue

2026-04-09 04:33:48 +00:00

[AUTO-EPIC] Epic Planning Health Report (Cycle 10) #5268

HAL9000 referenced this issue

2026-04-09 17:45:20 +00:00

[AUTO-IMP-POOL] Implementation Pool Tracking (Cycle 1) #6202

HAL9000 referenced this issue

2026-04-14 10:02:29 +00:00

fix(git_tools): eliminate TOCTOU race in _get_base_env() with double-checked locking #8255

HAL9000 referenced this issue

2026-04-14 10:13:55 +00:00

fix(git_tools): eliminate TOCTOU race in _get_base_env() with double-checked locking #8255

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bugfix/m3-behave-parallel-failed-chunk-logs

bugfix/7664-automation-tracking-label-requirements

docs/auto-time-1-timeline-update-2026-04-14

docs/auto-docs-1-milestone-v3-updates

fix/issue-6344-plan-execute-rich-output

docs/action-config-schema-api

fix/bug-hunt-supervisor-nonexistent-file-preflight

fix/retry-policy-model-missing-fields

docs/validation-gate-empty-run-guard

auto-arch-15/spec-retry-policy-canonical-fields

docs/lockservice-advisory-locking

docs/changelog-plan-fix-4197

spec/milestone-plan-section

docs/update-changelog-recent-features

fix/test-infra-remove-redundant-python-variable-robot-files

timeline/day-104-2026-04-14-cycle2

fix/bdd-feature-file-tags

auto-arch-13/spec-default-automation-profile

docs/auto-docs-cycle-1-2026-04-12

docs/cycle-1-git-worktree-sandbox

spec/architecture-critical-gap-fixes

docs/timeline-day-104-auto-time-2

auto-arch-1/add-v380-v390-milestone-plan

docs/developer-setup-guide

fix/auto-profile-spec-prose-description

auto-arch-10/spec-tui-a2a-integration-layer

spec/resource-event-types-clarification

auto-docs-4/changelog-and-observability

auto-arch-4/adr-049-layered-boundary-enforcement

docs/a2a-protocol-autonomy-hardening

auto-arch-9/spec-v3.8.0-milestone-plan

docs/auto-docs-3-reference-index

auto-arch-7/spec-apply-git-worktree

docs/timeline-day104-cycle1-auto-time-4

docs/auto-docs-cycle-1-changelog-updates

auto-arch-6/adr-049-spec-restructuring

docs/auto-docs-1-v340-acms-context-management

docs/auto-docs-1-v320-v330-cli-reference

auto-arch-5/v3.9.0-milestone-plan

test/create-scripts

auto-time-1-day104

timeline/day-104-2026-04-14

docs/auto-time-4-day103-cycle5

auto-time-3-day103-cycle4

auto-docs-5-architecture-overview

spec/three-way-merge-strategy-v3.3.0

spec/checkpoint-system-v3.3.0

auto-docs-4-api-docs-update

auto-docs-1-changelog-expansion

spec/invariant-management-system-v3.2.0

pr-8289

spec/plan-correction-engine-v3.2.0

spec/layered-architecture-boundary-policy

spec/tui-materializer-a2a-integration-v3.7.0

spec/decision-recording-system-v3.2.0

docs/auto-docs-1-milestone-overview

pr-7484

pr-4212

auto-arch-3/v3.8.0-milestone-plan

auto-docs-6/troubleshooting-and-config

auto-time-1-day103-session5

auto-docs-5/contributor-guide-and-readme

docs/plan-tree-ulid-examples

docs/m3-spec-clarify-path-datetime-plugin-contracts

docs/auto-docs-cycle-10-diagnostics-ref

auto-docs-3/user-guide-and-architecture

docs/cycle-7-changelog-update

spec/reconciliation-failure-behavior

auto-docs-2/api-documentation

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auto-docs-1/release-notes-v3.0-v3.1

spec/update-validation-attach-project-delete

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auto-arch-1/adr-049-052-violations

auto-time-1-day103

docs/auto-docs-cycle-13-updates

docs/timeline-day-102-auto-time

timeline/day-103-2026-04-13

spec/arch-invariant-cli-completeness

spec/update-cycle1-validation-attach-project-delete

docs/add-session-management-showcase

spec/arch-sandbox-path-correction-cycle9

spec/architecture-v380-milestone-plan

docs/auto-docs-cycle-12-updates

docs/cycle-1-validation-gate-fix

docs/2026-04-08-unreleased-changelog

docs/auto-docs-cycle-2-2026-04-10

docs/session-4615-2026-04-08-cycle1

feat/issue-6361-shell-safety-service-tui

spec/architecture-cycle-25-new-features

fix/issue-6345-automation-profile-add-output

docs/timeline-day-102-2026-04-12

docs/cycle-2-git-worktree-acms-hydrator

spec/arch-sandbox-cleanup-discovery

docs/timeline-day96-2026-04-08

docs/auto-docs-cycle-11

spec/fix-sandbox-strategy-protocol-name

spec/arch-acms-tier-hydration

fix/v3.4.0/context-settings-defaults

docs/add-example-repl-and-actor-run

docs/auto-docs-cycle-10-updates

docs/session-4-2026-04-08-updates

docs/showcase-all-examples-consolidated

docs/timeline-day-97

docs/acms-context-hydrator-cycle2

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timeline/day-101-2026-04-11

docs/timeline-day99-2026-04-09-v2

docs/auto-docs-cycle-2-worktree-acms

spec/architecture-v3.8.0-milestone-plan

docs/api-lsp-acms-reference

improvement/agent-bug-hunt-pool-supervisor-yaml-syntax-fix

spec/project-delete-deleted-at-field

spec/architecture-provider-registry-tui-materializer

spec/document-reconciliation-blocked-error-5942

fix/issue-7482-git-log-injection

spec/devcontainer-auto-discovery-schema

feat/issue-6350-conversation-content-pruning

docs/update-module-guides-2026-04-10

timeline/day-100-2026-04-10-auto-time-cycle1

timeline/day-99-2026-04-09-auto-time-v2

docs/cycle-3-module-guides

timeline/day-99-2026-04-09-auto-time

pr-4226

spec/additional-llm-providers-gemini-groq-cohere-together-ollama-mistral

spec/document-context-tier-hydrator-6175

docs/timeline-day99-2026-04-09

spec/invariant-cli-clarifications

docs/add-example-project-init-and-context-management

spec/reconciliation-blocked-error-documentation

spec/fix-invariant-precedence-reference-5861

spec/fix-plan-correct-accepts-plan-id-5558

spec/fix-validation-attach-synopsis-5328

docs/timeline-day-99-cycle-1

docs/timeline-day-99-cycle-2

fix/actor-context-list-regex-arg

docs/timeline-day-99-cycle-3

spec/arch-security-mode-init

docs/auto-docs-cycle-9-updates

fix-resource-fix-resource-remove-to-check-correct-edge-table

feat/issue-6434-tui-env-var-expansion

fix/issue-6321-plan-prompt-timing-field

fix/issue-6322-resource-add-url-flag

feat/issue-6348-sessions-screen

spec/plan-show-command

temp

feat/harden-label-restrictions-1775753628

spec/invariant-reconciliation-failure-behavior

spec/add-reconciliation-failure-behavior-5942

spec/architecture-corrections-cycle3

spec/checkpoint-trigger-names-and-config-key-fix

spec/fix-ai-provider-interface-5801

spec/azure-api-version-default-update

docs/auto-docs-writer-cycle1-labels

spec/fix-resource-type-yaml-format-5622

spec/add-plan-revert-resume-commands-5574

docs/auto-docs-cycle-1-2026-04-09

spec/plan-correct-plan-id-or-decision-id-5558

spec/fix-subgraph-node-actor-ref-field-5427

issue/5284-master-ci-fix

timeline/day-99-2026-04-09-v2

merge-me

docs/session-3377-initial-docs-update

fix/llm-provider-subpackage-exports

spec/arce-acronym-and-tui-keybinding-fixes

spec/architecture-corrections-cycle2

spec/architecture-corrections-cycle1

docs/cycle-1-updates

spec/tui-clarifications-session-export-persona

docs/session-4940-2026-04-08-cycle1

spec/architecture-milestone-plan-v3.2-v3.7

docs/session-4743-2026-04-08-cycle1

docs/timeline-day-98

fix/plan-lifecycle-service-rollback-method

docs/timeline-day98-2026-04-08-v2

docs/add-example-action-and-plan-management

docs/session-2026-04-06-updates

docs/ca-docs-writer-v3.8.1-2026-04-05

fix/session-tell-stub-missing-panels-and-actor-execution

improvement/agent-arch-guard-clone-failure-handling

improvement/agent-test-infra-health-spam-fix-v2

fix-tdd-invert-non-assertion-exceptions

improvement/agent-arch-guard-clone-failure

bugfix/3472-fix-tdd-inversion-logic

bugfix/989-fix-persistence-json-decode-error

improvement/agent-supervisor-tracking-labels-v2

docs/timeline-day95-v2

docs/timeline-day95-final

docs/update-lsp-api-and-changelog

fix/lsp-resource-handler-module-missing

docs/timeline-day95-final-2026-04-05

fix/a2a-plan-correct-rollback-wiring

docs/add-lsp-api-and-changelog-2026-04-05

fix/tool-registry-validation-type-discriminator

docs/v3.7.0-documentation-update

docs/ca-docs-writer-2026-04-05-cycle2

fix/invariant-set-merge-action-scope

docs/unreleased-feature-docs

fix/concurrency-cost-tracker-record-usage-race-condition

improvement/agent-ca-test-infra-improver-failure-handling

docs/update-changelog-mcp-plan-ci-2026-04-05

improvement/agent-pr-reviewer-milestone-prioritization

docs/timeline-day95-refresh-2026-04-05

improvement/agent-mandatory-labels-tracking-issues

docs/api-domain-providers-changelog-2026-04-05

docs/ca-docs-writer-2026-04-05

docs/timeline-day95-refresh

fix/skill-add-include-validation

docs/timeline-day-95-2026-04-05-update3

docs/timeline-day-95-2026-04-05-update2

docs/ci-incident-runbook-2597

improvement/agent-ca-test-infra-improver-worker-api-mode

docs/shell-safety-api-and-readme-highlights

docs/timeline-day-55-2026-04-04-v2

docs/timeline-day-55-2026-04-04

docs/timeline-day54-update3

improvement/agent-ca-test-infra-improver-fixes

spec/restructure-monolithic-to-split

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fix/1473-plan-cancel

fix/1425-test

fix/1426-config

fix/1421-perf

fix/1424-impl

test/int-wf16-devcontainer

feature/m8-tui-persona-export

feature/m7-post-resource-equivalence

test/e2e-m4-acceptance

feature/m6-tantivy-backend

feature/m6-estimation

feature/m6-estimation-report-model

feature/observability-prometheus-audit

feat/server-auth-namespace

feature/m8-session-editing

feature/llm-actor-subplan-wiring

feature/m8-tui-first-run-actor-selection

feature/m8-tui-conversation-block-catalog

feature/m8-tui-settings-screen

feature/m7-e2e-porting

feature/m6-estimation-historical-stats

feature/m8-tui-persona-export-import

feature/m8-tui-sessions-screen

feature/m7-graph-backend

feature/m8-tui-block-context-menu

feature/m8-tui-tool-call-expand

feature/m4-missing-builtin-tools

docs/v3.7.0-release-docs

feature/m8-tui-session-export

test/e2e-wf15-disaster-recovery

test/e2e-wf03-refactoring

test/e2e-m3-acceptance

feature/m8-tui-prompt-history

feature/m8-tui-actor-thought-block-rendering

bugfix/m6-build-hierarchy-child-ids

feature/resource-inheritance-wiring

test/e2e-wf09-session

test/e2e-wf06-doc-generation

test/e2e-wf08-cloud-infra

test/e2e-wf02-test-generation

test/e2e-wf13-custom-profile

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test/e2e-wf01-hello-world

test/int-wf17-explicit-container

test/int-wf12-hierarchical

test/int-wf15-disaster-recovery

test/int-wf13-custom-profile

test/int-wf03-refactoring

test/int-wf11-graph-actor

test/int-wf10-batch

test/int-wf09-session

feature/m3-tdd-issue-consistency-gate

feature/m3-invariant-enforcement-strategize

test/int-wf18-container-clone

test/int-wf01-hello-world

feature/m6-diagnostic-dashboard-health-categories

feature/m6-cli-polish

fix/e2e-db-isolation

feature/m7-post-tui

feature/m9-asgi-endpoint

feature/m7-post-server

tdd/m7-audit-session-race

tdd/m3-skill-add-regression

feature/m9-remote-repos

feature/fs-mount-file-types

tdd/container-resolve-crash

test/e2e-m1-acceptance

test/e2e-m2-acceptance

eugen.thaci-patch-3

eugen.thaci-patch-2

eugen.thaci-patch-1

aditya-fix-latest

feature/m4-secret-masking-llm-context

aditya-fix

refactor/m3-replace-mktemp

refactor/m3-remove-unittest-mock-integration

refactor/m3-remove-robot-mock-imports

refactor/m3-remove-mock-llm-integration

docs/improved-menu-adr

feature/m7-post-auth

feature/m3-fix-resource-bootstrap

feature/post-safety-profile-tests

integration/batch-2026-03-02

feat/slipcover

docs/safety-profile-spec-composition

integrate/freemo-batch-1

feature/m4-error-recovery

feature/m4-security-template

feature/m3-validation-pipeline

develop-aditya-2

feature/m3-diff-review

feature/m3-validation-apply

feature/m6-acp-stubs

feature/m4-correction-flows

feature/m1-plan-execute-runtime

feature/m4-security-exceptions

feature/m4-definition-of-done

feature/m4-correction-model

feature/m1-apply-pipeline

feature/m5-automation-profiles

feature/m2-lsp-stubs

feature/m3-invariants

feature/m1-actor-runtime

feature/docs-v2-restore

feature/m6-perf-scale

feature/m6-validation-edge

feature/m3-session-cli

feature/m1-persistence-tests-robot

feature/m3-config-cli

feature/m1-cli-tests-robot

feature/m5-subplan-tests

feature/m6-review-playbook

feature/aditya-m3-actor-loader

feature/m3-skill-protocol

feature/m4-automation-legacy-cleanup

feature/m3-change-model

feature/m3-skill-git

feature/m3-skill-registry

feature/m4-security-eval

fix/robot-tests

feature/m3-actor-registry

feature/m3-tool-cli

feature/m4-automation-profiles-cli

feature/m2-resource-cli-extensions

feature/m3-actor-loader

feature/m3-tool-domain-robot

feature/m3-skill-domain-robot

feature/m3-skill-cli

feature/m1-resource-db-robot-tests

feature/m3-session-domain-robot

feature/m1-persistence-tests

feature/m1-cli-tests

ten-branches-backup

feature/m3-skill-schema

feature/m3-session-persistence

feature/automation-profiles-and-resource-dag

feature/m1-plan-repo

feature/m1-db-plan-phase-rebaseline

feat/B4-sandbox

feat/B2-cli-wiring

feat/B5-project-persistence

feat/B1-project-data-models

feat/b1-data-models

feat-repo-manager-and-sourcegraph-support

feat/actor-schema

fix/component-isolation-security-fix

feat/ontology-agent

fix/error-handling-security-fix

fix/concurrency-security-fix

fix/serialization-security-fix

fix/server-side-request-forgery-security-fix

fix/file-system-security

fix/template-injection-fix

fix/data-injection-fix

tests/unit-tests

latest/poetry-generator

poetry-generator

config/contract-metadata-extractor

docs/readme-yaml-syntax

config/memory-yaml

fix/double-response

brent-additions

intel_2_demo

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#5169 EPIC: Large Project Indexing — 10,000+ File Codebase Support (ACMS v3.4.0)

cleveragents/cleveragents-core

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#5238 feat(context): implement index query API for context assembly (by path, extension, recency)

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