Refactor: Use repository pattern instead of raw SQL in cli/commands/project.py

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fix/config-service-remove-undocumented-local-scope

bugfix/validation-attach-named-option-format

docs/add-example-tool-and-validation-management

bugfix/project-show-resource-name

bugfix/backlog-resource-schema-missing-overlay-strategy

fix/action-argument-schema/misleading-error-message

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fix/a2a-plan-execute-full-lifecycle

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spec/update-sse-streaming-event-example

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Refactor: Use repository pattern instead of raw SQL in cli/commands/project.py #1438